PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr033315.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 295aa    MW: 33887.7 Da    PI: 6.7949
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr033315.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.93e-47191453128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 
                  pGfrFhPt+eel+ +yLk  v gk+l++ ++i  ++iy+++PwdLp   k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++++s    ++
  Pbr033315.1  19 PGFRFHPTEEELLEFYLKSMVFGKRLRF-DIIGFLNIYHHDPWDLPGLSKIGEREWYFFVPRDRKHGSGGRPNRTTETGFWKATGSDRKIVSLsnPKR 115
                  9*************************99.99***************8778899*************************************99755677 PP

          NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                   +gl+ktLvfykgrap+g+ktdWvm+eyrl
  Pbr033315.1 116 IIGLRKTLVFYKGRAPRGSKTDWVMNEYRL 145
                  7***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.23E-5717163IPR003441NAC domain
PROSITE profilePS5100554.66917163IPR003441NAC domain
PfamPF023654.5E-2519145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MAANTIDPDQ QMTPEFELPG FRFHPTEEEL LEFYLKSMVF GKRLRFDIIG FLNIYHHDPW  60
DLPGLSKIGE REWYFFVPRD RKHGSGGRPN RTTETGFWKA TGSDRKIVSL SNPKRIIGLR  120
KTLVFYKGRA PRGSKTDWVM NEYRLPDNCQ YLKDIVLCKI YRKATSLKVL EQMAAIEGDQ  180
IKNFHASPNS SPPPTSMDSI SFCSQALQED LTPQISTNHV VFKQEIEEAA LVIAQEQKDE  240
NAMEIKGSPP PPMYNLPELQ VPKYSMDWTQ DTVWTQMNSP WLQNLTPLAN ILNF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-471916317168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009341552.10.0PREDICTED: NAC transcription factor 29
TrEMBLM5VLG71e-180M5VLG7_PRUPE; Uncharacterized protein
STRINGGLYMA11G10230.11e-131(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62143251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-117NAC domain containing protein 36